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Biology
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keywords:(Biology)
Reconstruction of Reticulate Networks from Gene Trees
Efficient Algorithms for Detecting Signaling Pathways in Protein Interaction Networks
Predicting Transcription Factor Binding Sites Using Structural Knowledge
Segmentation Conditional Random Fields (SCRFs): A New Approach for Protein Fold Recognition
A Fundamental Decomposition Theory for Phylogenetic Networks and Incompatible Characters
Avoiding Local Optima in Single Particle Reconstruction
Predicting Protein-Peptide Binding Affinity by Learning Peptide-Peptide Distance Functions
Mapping Molecular Landscapes Inside Cells
RNA-RNA Interaction Prediction and Antisense RNA Target Search
Learning Interpretable SVMs for Biological Sequence Classification
The Factor Graph Network Model for Biological Systems
Recognition of Binding Patterns Common to a Set of Protein Structures
A High-Throughput Approach for Associating microRNAs with Their Activity Conditions
Pairwise Local Alignment of Protein Interaction Networks Guided by Models of Evolution
Improved Recombination Lower Bounds for Haplotype Data
HAPLOFREQ - Estimating Haplotype Frequencies Efficiently
Engineering Gene Regulatory Networks: A Reductionist Approach to Systems Biology
Information Theoretic Approaches to Whole Genome Phylogenies
Constructing a Smallest Refining Galled Phylogenetic Network
Efficient q-Gram Filters for Finding All epsilon-Matches over a Given Length
A Linear-Time Algorithm for the Perfect Phylogeny Haplotyping (PPH) Problem
Modeling the Combinatorial Functions of Multiple Transcription Factors
Amino Acid Sequence Control of the Folding of the Parallel beta-Helix, the Simplest beta-Sheet Fold
Using Multiple Alignments to Improve Gene Prediction
EigenMS: De Novo Analysis of Peptide Tandem Mass Spectra by Spectral Graph Partitioning
Motif Discovery Through Predictive Modeling of Gene Regulation
Rapid Protein Side-Chain Packing via Tree Decomposition
Towards an Integrated Protein-Protein Interaction Network
Graph Theoretical Insights into Evolution of Multidomain Proteins
Discovery and Annotation of Genetic Modules
Consensus Folding of Unaligned RNA Sequences Revisited
A Regulatory Network Controlling Drosophila Development
Efficient Calculation of Interval Scores for DNA Copy Number Data Analysis
Finding Novel Transcripts in High-Resolution Genome-Wide Microarray Data Using the GenRate Model
Human Genome Sequence Variation and the Inherited Basis of Common Disease
A Practical Approach to Significance Assessment in Alignment with Gaps
A Polynomial Time Solvable Formulation of Multiple Sequence Alignment
Yeast Cells as a Discovery Platform for Neurodegenerative Disease
Maximum Likelihood of Evolutionary Trees Is Hard
RIBRA - An Error-Tolerant Algorithm for the NMR Backbone Assignment Problem
Stability of Rearrangement Measures in the Comparison of Genome Sequences
A Hidden Markov Model Based Scoring Function for Mass Spectrometry Database Search
Peptide Sequence Tags for Fast Database Search in Mass-Spectrometry
A Hybrid Micro-macroevolutionary Approach to Gene Tree Reconstruction
Fatigue in transport: a review of exposure, risks, checks and controls