Learning Interpretable SVMs for Biological Sequence Classification
The Factor Graph Network Model for Biological Systems
RIBRA - An Error-Tolerant Algorithm for the NMR Backbone Assignment Problem
Graph Theoretical Insights into Evolution of Multidomain Proteins
Consensus Folding of Unaligned RNA Sequences Revisited
A Regulatory Network Controlling Drosophila Development
Efficient Calculation of Interval Scores for DNA Copy Number Data Analysis
Finding Novel Transcripts in High-Resolution Genome-Wide Microarray Data Using the GenRate Model
A Linear-Time Algorithm for the Perfect Phylogeny Haplotyping (PPH) Problem
Modeling the Combinatorial Functions of Multiple Transcription Factors
Amino Acid Sequence Control of the Folding of the Parallel beta-Helix, the Simplest beta-Sheet Fold
Using Multiple Alignments to Improve Gene Prediction
EigenMS: De Novo Analysis of Peptide Tandem Mass Spectra by Spectral Graph Partitioning
Human Genome Sequence Variation and the Inherited Basis of Common Disease
A Practical Approach to Significance Assessment in Alignment with Gaps
A Polynomial Time Solvable Formulation of Multiple Sequence Alignment