EigenMS: De Novo Analysis of Peptide Tandem Mass Spectra by Spectral Graph Partitioning
Reconstruction of Reticulate Networks from Gene Trees
Efficient Algorithms for Detecting Signaling Pathways in Protein Interaction Networks
Improved Recombination Lower Bounds for Haplotype Data
HAPLOFREQ - Estimating Haplotype Frequencies Efficiently
Engineering Gene Regulatory Networks: A Reductionist Approach to Systems Biology
Information Theoretic Approaches to Whole Genome Phylogenies
Constructing a Smallest Refining Galled Phylogenetic Network
Efficient q-Gram Filters for Finding All epsilon-Matches over a Given Length
Learning Interpretable SVMs for Biological Sequence Classification
The Factor Graph Network Model for Biological Systems
Human Genome Sequence Variation and the Inherited Basis of Common Disease
A Practical Approach to Significance Assessment in Alignment with Gaps
A Polynomial Time Solvable Formulation of Multiple Sequence Alignment
Yeast Cells as a Discovery Platform for Neurodegenerative Disease
Motif Discovery Through Predictive Modeling of Gene Regulation
Rapid Protein Side-Chain Packing via Tree Decomposition
Towards an Integrated Protein-Protein Interaction Network
Recognition of Binding Patterns Common to a Set of Protein Structures