EigenMS: De Novo Analysis of Peptide Tandem Mass Spectra by Spectral Graph Partitioning
Graph Theoretical Insights into Evolution of Multidomain Proteins
Discovery and Annotation of Genetic Modules
Consensus Folding of Unaligned RNA Sequences Revisited
A Regulatory Network Controlling Drosophila Development
Efficient Calculation of Interval Scores for DNA Copy Number Data Analysis
Finding Novel Transcripts in High-Resolution Genome-Wide Microarray Data Using the GenRate Model
Improved Recombination Lower Bounds for Haplotype Data
HAPLOFREQ - Estimating Haplotype Frequencies Efficiently
Engineering Gene Regulatory Networks: A Reductionist Approach to Systems Biology
Information Theoretic Approaches to Whole Genome Phylogenies
Constructing a Smallest Refining Galled Phylogenetic Network
Efficient q-Gram Filters for Finding All epsilon-Matches over a Given Length
Stability of Rearrangement Measures in the Comparison of Genome Sequences
A Hidden Markov Model Based Scoring Function for Mass Spectrometry Database Search
Peptide Sequence Tags for Fast Database Search in Mass-Spectrometry
A Hybrid Micro-macroevolutionary Approach to Gene Tree Reconstruction
Learning Interpretable SVMs for Biological Sequence Classification