Graph Theoretical Insights into Evolution of Multidomain Proteins
Discovery and Annotation of Genetic Modules
Consensus Folding of Unaligned RNA Sequences Revisited
A Regulatory Network Controlling Drosophila Development
Efficient Calculation of Interval Scores for DNA Copy Number Data Analysis
Finding Novel Transcripts in High-Resolution Genome-Wide Microarray Data Using the GenRate Model
Motif Discovery Through Predictive Modeling of Gene Regulation
Rapid Protein Side-Chain Packing via Tree Decomposition
Towards an Integrated Protein-Protein Interaction Network
Learning Interpretable SVMs for Biological Sequence Classification
The Factor Graph Network Model for Biological Systems
Predicting Transcription Factor Binding Sites Using Structural Knowledge
Segmentation Conditional Random Fields (SCRFs): A New Approach for Protein Fold Recognition
A Fundamental Decomposition Theory for Phylogenetic Networks and Incompatible Characters
Avoiding Local Optima in Single Particle Reconstruction
Reconstruction of Reticulate Networks from Gene Trees
Efficient Algorithms for Detecting Signaling Pathways in Protein Interaction Networks
Maximum Likelihood of Evolutionary Trees Is Hard